DisGeNET - a database of gene-disease associations

List of shared variants

Dementia, C0497327

Disease: Alzheimer's Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs9939609	FTO	0.559	0.720	16	53786615	intron variant	T/A	snv		0.41	98
rs956572	BCL2	0.742	0.280	18	63153338	intron variant	A/G	snv		0.65	11
rs9357347	LOC107986595	0.851	0.080	6	41182853	intergenic variant	A/C;T	snv			4
rs9331896	CLU ; MIR6843	0.851	0.080	8	27610169	intron variant	C/G;T	snv			4
rs854560	PON1	0.513	0.800	7	95316772	missense variant	A/C;G;N;T	snv	0.29		113
rs80356715	TARDBP	0.807	0.120	1	11016874	missense variant	C/G;T	snv	8.0E-06; 2.2E-04		6
rs766647311	TREML1 ; LOC105375056 ; TREM2	0.882	0.080	6	41159841	missense variant	C/A;T	snv	4.0E-06; 4.0E-06		3
rs765670175	PSEN1	0.790	0.120	14	73173646	missense variant	T/A	snv	8.0E-06		7
rs759834365	BDNF-AS ; BDNF	0.448	0.760	11	27658456	missense variant	C/T	snv	1.2E-05		237
rs75932628	LOC105375056 ; TREM2	0.662	0.480	6	41161514	missense variant	C/A;T	snv	6.8E-05; 2.6E-03		28
rs7493	PON2	0.677	0.440	7	95405463	missense variant	G/C	snv	0.27	0.27	24
rs748703149	APOE	0.882	0.080	19	44908729	missense variant	G/A;C;T	snv	6.3E-06; 6.3E-06		3
rs7412	APOE	0.641	0.640	19	44908822	missense variant	C/T	snv	6.2E-02	7.9E-02	47
rs6857	NECTIN2	0.790	0.240	19	44888997	3 prime UTR variant	C/T	snv		0.13	16
rs662	PON1	0.485	0.840	7	95308134	missense variant	T/C	snv	0.38	0.42	157
rs6489630	NTF3	0.882	0.080	12	5495458	intron variant	T/C	snv		0.75	3
rs63751438	MAPT	0.776	0.120	17	46010388	missense variant	C/T	snv			16
rs63751287	PSEN1	0.742	0.120	14	73192792	missense variant	A/G;T	snv			13
rs63751273	MAPT	0.645	0.280	17	46010389	missense variant	C/T	snv			42
rs63751039	APP	0.776	0.200	21	25891855	missense variant	T/C	snv			8
rs63751037	PSEN1	0.790	0.080	14	73173642	missense variant	A/G	snv			7
rs63750907	PSEN1	0.807	0.120	14	73173667	missense variant	C/T	snv			6
rs63750900	PSEN1	0.763	0.160	14	73198067	missense variant	G/A	snv	4.0E-06	7.0E-06	9
rs63750579	APP	0.742	0.280	21	25891856	missense variant	C/G;T	snv			13
rs63750570	MAPT	0.827	0.120	17	46018629	missense variant	G/A	snv			8